Human Evolutionary Ecology and Health James Holland Jones

Publications

  • Hazel, A., M. C. Davidson A. Rogers, M. B. Barrie, A. Freeman, M. Mbayoh, M. Kamara, S. Blumberg, T. M. Lietman, G. W. Rutherford, J. H. Jones, T. C. Porco, E. T. Richardson, J. D. Kelly. (2023) Social network analysis of Ebola virus disease during the 2014 outbreak in Sukudu, Sierra Leone, in press, Open Forum Infectious Diseases. (doi:10.1093/ofid/ofac593)

  • Randolph, S.G., D.J. Ingram, L.M. Curran, J.H. Jones, and W.H. Durham. (2022) Urban wild meat markets in Cameroon: Actors and motives. World Development. 160: 106060. (doi:10.1016/j.worlddev.2022.106060)

  • Pisor, A.C., X. Basurto, K. G. Douglass, K. J. Mach, E. Ready, J. M. Tylianakis, A. Hazel, M. A. Kline, K. L. Kramer, J. S. Lansing, M. Moritz, P. E. Smaldino, T. F. Thornton, and J. H. Jones (2022). Effective Climate-Change Adaptation Means Supporting Community Autonomy. 12: 213–215. Nature Climate Change. (doi:10.1038/s41558-022-01303-x)

  • Price, M.H., J.M. Capriles, J. Hoggarth, R.K. Bocinsky, C.E. Ebert, and J.H. Jones. (2021). End-to-end Bayesian analysis for summarizing sets of radiocarbon dates. 135: 105473. Journal of Archaeological Science. (doi:10.1016/j.jas.2021.105473)

  • Hazel, A., G. Meeks, N. Bharti, J. Jakurama, J. Matundu, K. Tjinginda, J.H. Jones. (2021) Women's Responses to Climate Change in Rural Namibia: Subsistence, Social Ties, and Reproductive Health. American Journal of Human Biology. 33(4): e23633. (doi:10.1002/ajhb.23633) 

  • Smaldino, P. and J.H. Jones. (2021) Coupled Dynamics of Behavior and Disease Contagion Among Antagonistic Groups. Evolutionary Human Sciences. 3: e28. (doi:10.1017/ehs.2021.22) 

  • Jones, J.H., A.C. Pisor, K.G. Douglass, R.B. Bird, E. Ready, A. Hazel, J. Hackman, K.L. Kramer, T.A. Kohler, H. Pontzer, M.C. Towner. (2021) How Can Evolutionary and Biological Anthropologists Engage Broader Audiences. American Journal of Human Biology. 33(4): e23592. (doi:10.1002/ajhb.23592)

  • Richardson, E.T., M.M. Malik, W.A. Darity, A.K. Mullen, M.E. Morse, M. Malik, A. Maybank, M.T. Bassett, P.E. Farmer, L. Worden, and J.H. Jones. (2021) Reparations for Black American Descendants of Persons Enslaved in the U.S. and Their Estimated Impact on SARS-CoV-2 Transmission. Social Science and Medicine. 276:113741. (doi:10.1016/j.socscimed.2021.113741)

  • Arthur, R.A., J.H. Jones, M. Bonds, Y. Ram, M.W. Feldman. (2021) Complex Dynamics Induced by Delayed Adaptive Behavior During Outbreaks. PLoS Computational Biology. 17(2): e1008639. (doi:10.1371/journal.pcbi.1008639)

  • Wood, B.M. J. Harris, K. Sayre, D. Raichlen, H. Pontzer, A. Sancilio, C. Berbesque, A. Crittenden, A. Mabulla, R. McElreath, E. Cashdan, J.H. Jones. (2021) Gendered Movement Ecology and Landscape use in Hadza Hunter-Gatherers. Nature Human Behaviour. 5: 436–446 (doi:10.1038/s41562-020-01002-7)

  • Jones, J.H., E. Ready, and A.C. Pisor. Want Climate-Change Adaptation? Evolutionary Theory Can Help. American Journal of Human Biology. 33(4): e23539. (doi:10.1002/ajhb.23539)

  • Pisor, A.C. and J.H. Jones. Human Adaptation to Climate Change: An Introduction to the Special Issue. American Journal of Human Biology. 33(4): e23530. (doi:10.1002/ajhb.23530)

  • Pisor, A.C. and J.H. Jones. Do People Manage Climate Risk Through Long-Distance Relationships? American Journal of Human Biology. 33(4): e23525. (doi:10.1002/ajhb.23525)

  • Jones, J.H., A. Hazel, Z. Almquist. (2020) Transmission-Dynamics Models for the SARS Coronavirus-2. American Journal of Human Biology. 32: e23512. (doi:10.1002/ajhb.23512)

  • Price, M.H. and J.H. Jones. (2020) Fitness Maximizers Employ Pessimistic Probability Weighting in Decisions Under Risk. Evolutionary Human Sciences. 2:e28. (doi:10.1017/ehs.2020.28)

  • Clech, L., J.H. Jones, M. Gibson. (2020) Inequality in the household and rural-urban migration in Ethiopian farmers. Evolutionary Human Sciences. 2:e9. (doi:10.1017/ehs.2020.10)

  • Kelly, J.D., S.R. Wannier, C. Sinai, C.A. Moe, N.A. Hoff, S. Blumberg, B. Selo, M. Mossoko, G. Chowell-Puente, J.H. Jones, E. Okitolonda-Wemakoy, G.W. Rutherford, T.M. Lietman, J.J. Muyembe-Tamfum, A.W. Rimoin, T.C. Porco, E.T. Richardson. (2020) The impact of different types of violence on Ebola virus disease transmission during the 2018-2020 outbreak in the Democratic Republic of the Congo, in press, Journal of Infectious Diseases. (doi:10.1093/infdis/jiaa163)

  • Wannier, R., L. Worden, N.A. Hoff, E. Amezcua, B. Selo, C. Sinai, M. Mossoko, B. Njoloko, E. Okitolonda-Wemakoy, P. Mbala-Kingebeni, S. Ahuka-Mundeke, J.J. Muyembe-Tamfum, E.T. Richardson, G.W. Rutherford, J.H. Jones, T.M. Lietman, A. Rimoin, T.C. Porco, J.D. Kelly. (2019) Estimating the impact of violence on transmission in Ebola Virus Disease outbreak, Democratic Republic of Congo, 2018–2019. Epidemics. 2019: 100353. (doi:10.1016/j.epidem.2019.100353)

  • Simons, N. G. Eick, M. Ruiz-Lopez, D. Hyeroba, P. Omeja, G. Weny, C. Chapman, T.L. Goldberg, H. Zheng, A. Shankar, W. Switzer, S. Frost, J.H. Jones, K. Sterner, and N. Ting. Genome-wide patterns of gene expression in a wild primate indicate species-specific mechanisms associated with tolerance to natural simian immunodeficiency virus infection. Genome Biology and Evolution. 11(6): 1630–1643. (doi:10.1093/gbe/evz099)

  • Hazel, M.A. and J.H. Jones (2018) Remoteness Influences Access to Sexual Partners and Drives Patterns of Viral Sexually Transmitted Disease Prevalence Among Nomadic Pastoralists. PLoS ONE. 13(1): e0191168. (doi:10.1371/journal.pone.0191168)

  • Kelly, J.D., M.B. Barrie, A.W. Mesman, S. Karku, K. Quiwa, M. Drasher, G.W. Slough, K. Dierberg, S. Koedoyoma, C.P. Lindan, J.H. Jones, G. Chamie, L. Worden, B. Greenhouse, S.D. Weiser, T.C. Porco, G.W. Rutherford, and E.T. Richardson. (2018) Anatomy of a Hotspot: Chain and Seroepidemiology of Ebola Virus Transmission, Sukudu, Sierra Leone, 2015-16. The Journal of Infectious Diseases. 217(8): 1214–1221. (doi:10.1093/infdis/jiy004)
  • Yu, Y.J., C. McCarty, J.H. Jones. (2018) Flexible Labors: The Work Mobility of Female Sex Workers (FSWs) in Post-Socialist China. Human Organization. 77(2): 146-156. (doi:10.17730/0018-7259-77.2.146)
  • Benjamin, D.J., J. O. Berger, M. Johannesson, B. Nosek, E.J. Wagenmakers, R. Berk, K.A. Bollen, B. Brembs, L. Brown, C. Camerer, D. Cesarini, C. Chambers, M. Clyde, T. Cook, P. de Boeck, Z. Dienes, A. Dreber, K. Easwaran, C. Efferson, E. Fehr, F. Fidler, A.P. Field, M. Forster, E. George, R. Gonzales, S. Goodman, E. Green, D. Green, A. Greenwald, J. Hadfield, L. Hedges, L. Held, T.H. Ho, H. Hoijtink, J.H. Jones, D. Hruschka, K. Imai, G. Imbens, J. Ioannidis, M. Jeon, M. Kirchler, D. Laibson, J. List, R. Little, S. Lupia, E. Machery, S. Maxwell, M. McCarthy, D. Moore, S. Morgan, M. Munaf, S. Nakagawa, B. Nyhan, T. Parker, L. Pericchi, M. Perugini, J. Rouder, J. Rousseau, V. Savalei, F. Schoenbrodt, T. Sellke, R. Shiffrin, B. Sinclair, D. Tingley, T. Van  Zandt, S. Vazire, D. Watts, C. Winship, R. Wolpert, Y. Xie, C. Young, J. Zinman, V.E. Johnson. (2017) Redefine Statistical Significance. Nature Human Behavior. 2: 6-10. (doi:10.1038/s41562-017-0189-z)
  • Arthur, R.F., E.S. Gurley, H. Salje, L.S.P. Bloomfield, J.H. Jones. (2017) Contact Structure, Mobility, Environmental Impact and Behavior: The Importance of Social Factors to Infectious Disease Dynamics and Disease Ecology. Philosophical Transactions of the Royal Society of London, B. 372: 20160454. (doi:10.1098/rstb.2016.0454)
  • Garchitorena, A, S.H. Sokolow, B. Roche, C.N. Ngonghala, M. Jocque, A. Lund, M. Barry, E. Mordecai, J.H. Jones, J.F. Guégan, M.H. Bonds. G. A. De Leo. (2017) Disease Ecology, Health and the Environment: Accounting for Ecological and Socio-Economic Drivers in the Control of Tropical Diseases of Poverty. Philosophical Transactions of the Royal Society of London, B. 372: 20160128. (doi:10.1098/rstb.2016.0128)
  • Jones, J.H. (2017) Uncertainty About Future Payoffs Makes Impatience Rational: Commentary on Pepper & Nettle. Behavioral and Brain Sciences. 40: 30-31.  (doi:10.1017/S0140525X17001005)
  • Yu, Y.J., C. McCarty, J.H. Jones (2016) In-Transitivity: Network Patterns of Female Sex Workers in China. Human Organization. 75(4): 358-370.  (doi:10.17730/1938-3525-75.4.358)
  • Richardson, E.T., J.D. Kelly, M.B. Barrie, A.W. Mesman, S. Karku, K. Quiwa, R.H. Marsh, S. Koedoyoma, F. Daboh, K.P. Barron, M. Grady, E. Tucker, K.L. Dierberg, G.W. Rutherford, M. Barry, J.H. Jones, M.B. Murray, and P.E. Farmer. (2016) Minimally Symptomatic Infection in an Ebola `Hotspot': A Cross-Sectional Serosurvey. PLoS Neglected Tropical Diseases. 10 (11):e0005087. (doi:10.1371/journal.pntd.0005087)
  • Lester, J.S.,  S. Paige, C.A. Chapman, M. Gibson, J.H. Jones, W.M. Switzer, N. Ting, T. Goldberg, S.D.W. Frost (2016) Assessing Commitment and Reporting Fidelity to a Text Message-Based Participatory Surveillance in Rural Western Uganda. PLoS ONE. 11(6): e0155971. (doi:10.1371/journal.pone.0155971)
  • Wood, B.M. and J.H. Jones (2015) Pursuit: A Foraging Simulation Tool for Research and Teaching. Evolutionary Psychology. 13(4): 1-6. (doi:10.1177/1474704915624738)
  • Padmanabha, H., F. Correa, C. Rubio, S. Osorio, J. Mendez, J.H. Jones and M.A. Diuk-Wasser. (2015) Human Social Behavior and Demography Drive Patterns of Fine-Scale Dengue Transmission in Endemic Areas of Colombia. PLoS ONE. 10(12):e0144451. (doi:10.1371/journal.pone.0144451)
  • Salkeld, D.S., K. Padgett, J.H. Jones, M. Antolin. (2015) A Public Health Perspective on Patterns of Biodiversity and Zoonotic Disease. Proceedings of the National Academy of Sciences, USA. 112 (46):E6261. (doi:10.1073/pnas.1517640112)
  • Jones, J.H. and S. Tuljapurkar. (2015) Measuring Selective Constraint on Fertility in Human Life Histories. Proceedings of the National Academy of Sciences, USA. 112 (29):8982-8986. (doi:10.1073/pnas.1422037112)
  • Jones, J.H. (2015) Human Life Histories and Resource Transfers. Annual Review of Anthropology. 44: 513-531. (doi:10.1146/annurev-anthro-102214-013938)
  • Ruiz-Lopez, M.-J., T.L. Goldberg C.A. Chapman, E. Johnson, P. Etter, J.H. Jones, W. Switzer, N Ting. (2015) Identification of SNP markers for the endangered Ugandan red colobus (Procolobus rufomitratus tephrosceles) using RAD sequencing. Molecular Ecology Resources. 15(3): 684-684. (doi: 10.1111/1755-0998.12388)
  • Metcalf, C.J.E. and J.H. Jones. (2015) The Evolutionary Dynamics of Timing of Maternal Immunity: Evaluating the Role of Age-Specific Mortality. Journal of Evolutionary Biology. 28(2): 493-502. (doi:10.1111/jeb.12583)
  • Paige, S.B., S.D.W. Frost, M.A. Gibson, J.H. Jones, T.L. Goldberg. (2014) Beyond Bushmeat: Animal Contact, Injury, and Zoonotic Disease Risk in Western Uganda. EcoHealth. 11(4): 534-543. (doi:10.1007/s10393-014-0942-y)
  • Richardson, E.T., S.E. Collins, T. Kung, J.H. Jones, K.H. Tram, L.-G. Bekker, A. Zolopa. (2014) Gender Inequality and HIV Transmission: A Global Analysis. Journal of the International AIDS Society. 17:19035. (doi:10.7448/IAS.17.1.19035).
  • Jones, J.H. and R.B. Bird. (2014) The Marginal Valuation of Fertility. Evolution and Human Behavior. 35(1): 65-71. (doi:10.1016/j.evolhumbehav.2013.10.002)
  • Jones, J.H., R.B. Bird, and D.W. Bird. (2013) To Kill a Kangaroo: Understanding the Decision to Pursue High-Risk/High-Gain Resources. Proceedings of the Royal Society of London, B. 280: 20131210. (doi:10.1098/rspb.2013.1210)
  • Hosseini, P.R., T. Fuller, R. Harrigan, D. Zhao, C.S. Arriola, A. Gonzalez, M.J. Miller, X. Xiao, T.B. Smith, J.H. Jones, P. Daszak. (2013) Metapopulation dynamics enable persistence of influenza, including A/H5N1, in poultry. PLoS ONE. 8(12):e80091. (doi:10.1371/journal.pone.0080091)
  • Ryan, S.J., A.P. Dobson, and J.H. Jones. (2013) The Effects of Contact Structure, Demography and Movement on Disease Transmission within a Primate Metapopulation. PLoS ONE.  8(10): e76863. (doi:10.1371/journal.pone.0076863)
  • Salkeld, D.J., Padgett, K.A., J.H. Jones. (2013) A meta-analysis suggesting that the relationship between biodiversity and risk of zoonotic pathogen transmission is idiosyncratic. Ecology Letters. 16(5): 679-686. (doi:10.1111/ele.12101)
  • Janes, C., K. Corbett, J.H. Jones, J. Trostle. (2012) The role of social sciences in predicting and responding to emerging zoonotic diseases.  The Lancet. 380(9857): 1884-1886. (doi:10.1016/S0140-6736(12)61725-5)
  • Cárcamo, C. P., P. E. et al. (2012). Prevalences of sexually transmitted infections in young adults and female sex workers in Peru: A national population-based survey. The Lancet Infectious Diseases. 12 (10):765-773. (doi:10.1016/S1473-3099(12)70144-5)
  • Jones, J.H. (2011) Primates and the Evolution of Long-Slow Life Histories. Current Biology.  21(18): R708-R717. (doi:10.1016/j.cub.2011.08.025)
  • Rudicell, R., Jones, J.H., E. Wroblewski, G.H. Learn, Y. Li, J.D. Robertson, E. Greengrass, F. Grossman, S. Kamenya, L. Pineta, D.C. Mjungu, E. Lonsdorf, A. Mosser, C. Lehman, D.A. Collins, B.F. Keele, J. Goodall, B.H. Hahn, A.E. Pusey, M.L. Wilson. (2010) Impact of Simian Immunodeficiency Virus Infection on Chimpanzee Population Dynamics. PLoS Pathogens. 6(9): e1001116. (doi: 10.1371/journal.ppat.1001116
  • Salkeld, D.J. M. Salathé, P. Stapp, J.H. Jones. Plague Outbreaks in Prairie Dog Populations Explained by Percolation Thresholds of Alternate Host Abundance, Proceedings of the National Academy of Sciences, USA, 107(32): 14247-14250. (doi:10.1073/pnas.1002826107).
  • Kazandjieva, M.A., J. W. Lee, M. Salathé, M. W. Feldman, J. H. Jones, and P. Levis. (2010) Measuring a Human Contact Network for Epidemiology Research. ACM Proceedings of the 6th Workshop on Hot Topics in Embedded Networked Sensors.
  • Jones, J.H., M.L. Wilson, C. Murray, and A.E. Pusey. (2010) Phenotypic quality influences fertility in Gombe chimpanzees. Journal of Animal Ecology. 79(6): 1262-1269. (doi:10.1111/j.1365-2656.2010.01687.x)
  • Salathé, M. and J.H. Jones. (2010) Dynamics and Control of Diseases in Networks with Community Structure, PLoS Computational Biology. 6(4): e1000736. (doi:10.1371/journal.pcbi.1000736)
  • Jones, J.H. (2010) Demography. In: Human Evolutionary Biology, In Muehlenbein, M, ed. Cambridge: Cambridge University Press. pp. 74-91.
  • Hacker, J.D., L.R. Hilde and J.H. Jones. (2010) The Impact of the American Civil War on Southern Marriage Patterns, Journal of Southern History, LXXVI(February): 1-32.
  • Jones, J.H. and M. Salathé. (2009) Early Assessment of Anxiety and Behavioral Response to Influenza A(H1N1), PLoS ONE 4(12): e8032. (doi:10.1371/journal.pone.0008032).
  • Jones, J.H. (2009) Anthropology as Biosocial Science: The Future of Cross-Cutting Research. Anthropology News, December 2009: 5.
  • Keele*, B.F., J. H. Jones*, K. A. Terio*, J. D. Estes*, R. S. Rudicell*, M. L. Wilson*, Y. Li, G. H. Learn, T. M. Beasley, J. Schumacher-Stankey, E. Wroblewski, A. Mosser, J. Raphael, S. Kamenya, E. V. Lonsdorf, J. G. Else, G. Silvestri, J. Goodall, P. M. Sharp, G. M. Shaw, A. E. Pusey and B. H. Hahn. (2009) Increased Mortality and AIDS-like Immunopathology in Wild Chimpanzees Infected with SIVcpz, Nature, 460: 515-519. (doi:10.1038/nature08200). *=authors contributed equally.
  • Jones, J.H. (2009) The force of selection on the human life cycle, Evolution and Human Behavior, 30(5): 305-314. (doi:10.1016/j.evolhumbehav.2009.01.005).
  • Jones, J.H. and B.D. Ferguson. (2009) Demographic and social predictors of intimate partner violence in Colombia: A dyadic power perspective, Human Nature, 20(2): 184-203. (doi:10.1007/s12110-009-9064-6)
  • Bliege Bird, R., D.W. Bird, B.F. Codding, C.H. Parker and J.H. Jones. (2008) Anthropogenic fire mosaics, biodiversity and Australian Aboriginal foraging strategies: A test of the “Fire Stick Farming” hypothesis. Proceedings of the National Academy of Sciences, USA. 105(39): 14796-14801. (doi: 10.1073/pnas.0804757105)
  • Jones, J.H. and R. Bliege Bird (2008) In defense of functionalism. Anthropology News, 49(7): 45-46.
  • Jones, J.H. (2008) Culture for epidemic models and epidemic models for culture. In M. Brown, ed., Explaining Culture Scientifically, Seattle: University of Washington Press. pp. 117-136.
  • Emery Thompson, M., J.H. Jones, A.E. Pusey, S. Brewer-Marsden, J. Goodall, D. Marsden, T. Matsuzawa, T. Nishida, V. Reynolds, Y. Sugiyama, and R.W. Wrangham. (2007) Aging and fertility in wild chimpanzees: implications for evolution of menopause. Current Biology, 17(24): 1-7. (doi:10.1016/j.cub.2007.11.033)
  • Jones, J.H. (2007) demogR: A package for the construction and analysis of age-structured demographic models in R. Journal of Statistical Software, 22(10): 1-28.
  • Jones, J.H. and B.D. Ferguson (2006) Excess male death leads to a severe marriage squeeze in Colombia, 1973-2005. Social Biology, 53(3-4): 140-151.
  • Handcock, M.S. and J.H. Jones. (2006) Interval estimates for epidemic thresholds in two-sex network models, Theoretical Population Biology. 70(2): 125-134.
  • Jones, J.H. (2006) The relative concentration of net maternity in chimpanzees and humans. American Journal of Human Biology, 18(2): 260
  • J.H. Jones (2005) Fetal programming: Adaptive life-history tactic or making the best of a bad start?American Journal of Human Biology, 17(1): 22-33.
  • Jones, J.H. (2005) Environmental variability, life-history tactics, and Neanderthal extinction. American Journal of Physical Anthropology, Suppl. 40: 123.
  • Handcock, M.S. and J.H. Jones. (2004) Likelihood-based inference for stochastic models of sexual network evolution. Theoretical Population Biology, 65: 413-422.
  • Jones, J.H. and M.S. Handcock. (2003a) Sexual contacts and epidemic thresholds. Nature, 423: 605-606.
  • Jones, J.H. and M.S. Handcock. (2003b) An assessment of preferential attachment as a mechanism for the growth of human sexual networks. Proceedings of the Royal Society of London, B. 270: 1123-1128.
  • Jones, J.H. (2003c) Review of Primate Life Histories and Socioecology, by P.M. Kappeler and M.E. Pereira, eds. Ecology, 85(2): 587-589.
  • Nishida, T. R.W. Wrangham, J.H. Jones, A.J. Marshall, J. Wakibara. (2001) Do chimpanzees Survive the 21st Century? In The Apes: The Challenges for the 21st Century. Chicago: Chicago Zoological Society. pp. 43-51.
  • Marshall, A.J., J.H. Jones, and R.W. Wrangham. (2000) The plight of the apes: The status of global ape populations. Brief prepared for H.R. 2340: The Great Ape Conservation Act.
  • Wrangham, R.W., J.H. Jones, G. Laden, D. Pilbeam, and N. Conklin-Brittain. (1999) The raw and the stolen: Cooking and the ecology of human origins. Current Anthropology. 40(5): 567-594.
  • Jones, J.H. (1998) Sex-biased mortality and the evolution of lemur social systems. American Journal of Physical Anthropology, Suppl. 26: 180.
  • Jones, J.H. (1997) Ethology. In T. Barfield, ed., The Dictionary of Anthropology. Oxford: Blackwell Publications. pp. 167-168.
  • Bercovitch, F.B., M.D. Hauser, and J.H. Jones. (1995) The endocrine stress response and alarm vocalizations in rhesus macaques. Animal Behaviour. 49: 1703-1706.
  • Wrangham, R. W., J. H. Jones, and M. Leighton. (1995) The allometry of energy allocation: Commentary. Current Anthropology. 36(2): 216.
  • Hauser, M. D. and J. H. Jones. (1995) Review of Aping Language, by Joel Wallman. American Journal of Physical Anthropology. 91: 531-533.